pyqmmm
¶
Python package for working with multiscale simulation data.
Subpackages¶
pyqmmm.md
pyqmmm.md.amber_toolkit
pyqmmm.md.bfactor_adder
pyqmmm.md.cc_coupling
pyqmmm.md.cluster_frame_indexer
pyqmmm.md.compare_distances
pyqmmm.md.dccm_plot_formator
pyqmmm.md.dssp_plotter
pyqmmm.md.edia_chain_calculator
pyqmmm.md.gbsa_analyzer
pyqmmm.md.hbond_analyzer
pyqmmm.md.hbond_compare
pyqmmm.md.md_vitals_plotter
pyqmmm.md.modeller_automator
pyqmmm.md.pdb_ensemble_generator
pyqmmm.md.ppm2png_converter
pyqmmm.md.quickcsa
pyqmmm.md.residue_lister
pyqmmm.md.restraint_plotter
pyqmmm.md.rmsd_clusters_colorcoder
pyqmmm.md.rmsd_plotter
pyqmmm.md.rmsf_calculator
pyqmmm.md.rmsf_plotter
pyqmmm.qm
pyqmmm.qm.bond_valence
pyqmmm.qm.charge_spin_extractor
pyqmmm.qm.eda_analyze
pyqmmm.qm.energy_plotly
pyqmmm.qm.energy_plotter
pyqmmm.qm.hydrogen_atom_optimizer
pyqmmm.qm.mechanism_plotter
pyqmmm.qm.missing_frame_checkup
pyqmmm.qm.orca_neb_restart
pyqmmm.qm.orca_scan_plotter
pyqmmm.qm.pdb_residue_extractor
pyqmmm.qm.pes_organizer
pyqmmm.qm.qtaim_analyzer
pyqmmm.qm.reaction_coordinate_collector
pyqmmm.qm.replace_pdb
pyqmmm.qm.res_name_format_extractor
pyqmmm.qm.residue_decomposition
pyqmmm.qm.residue_numerator
pyqmmm.qm.traj_atom_filter
pyqmmm.qm.traj_atom_swapper
pyqmmm.qm.traj_merger
pyqmmm.qm.traj_movie_generator
pyqmmm.qm.xyz_flipper